Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.04■□□□□ 0.32
CFAP99D6REC4 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.04■□□□□ 0.32
CFAP99D6REC4 AC104692.2-201ENST00000603054 253 ntBASIC17.04■□□□□ 0.32
CFAP99D6REC4 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.04■□□□□ 0.32
CFAP99D6REC4 AC004706.3-202ENST00000621574 984 ntBASIC17.04■□□□□ 0.32
CFAP99D6REC4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.04■□□□□ 0.32
CFAP99D6REC4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CFAP99D6REC4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.04■□□□□ 0.32
CFAP99D6REC4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CFAP99D6REC4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.04■□□□□ 0.32
CFAP99D6REC4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CFAP99D6REC4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CFAP99D6REC4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 MIR1199-201ENST00000621445 119 ntBASIC17.03■□□□□ 0.32
CFAP99D6REC4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 GPR89P-201ENST00000407924 1495 ntBASIC17.03■□□□□ 0.32
CFAP99D6REC4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.03■□□□□ 0.32
CFAP99D6REC4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CFAP99D6REC4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 AC093909.1-201ENST00000504731 1122 ntBASIC17.02■□□□□ 0.32
CFAP99D6REC4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CFAP99D6REC4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
CFAP99D6REC4 NFIC-211ENST00000641145 8399 ntBASIC17.02■□□□□ 0.31
CFAP99D6REC4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CFAP99D6REC4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.02■□□□□ 0.31
CFAP99D6REC4 LINC02012-201ENST00000608206 1725 ntBASIC17.01■□□□□ 0.31
CFAP99D6REC4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CFAP99D6REC4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CFAP99D6REC4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms