Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 KRT18P32-201ENST00000424695 1287 ntBASIC19.67■□□□□ 0.74
USP17L11C9JVI0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP17L11C9JVI0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 FAM58DP-201ENST00000428076 619 ntBASIC19.66■□□□□ 0.74
USP17L11C9JVI0 AL512356.2-201ENST00000546955 174 ntBASIC19.66■□□□□ 0.74
USP17L11C9JVI0 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 AL009183.1-201ENST00000603760 355 ntBASIC19.66■□□□□ 0.74
USP17L11C9JVI0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 AC016396.2-201ENST00000562575 1417 ntBASIC19.66■□□□□ 0.74
USP17L11C9JVI0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP17L11C9JVI0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 AC141586.5-201ENST00000624546 2050 ntBASIC19.65■□□□□ 0.74
USP17L11C9JVI0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 AC093525.9-201ENST00000624961 1746 ntBASIC19.65■□□□□ 0.74
USP17L11C9JVI0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP17L11C9JVI0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
USP17L11C9JVI0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.64■□□□□ 0.74
USP17L11C9JVI0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP17L11C9JVI0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP17L11C9JVI0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
USP17L11C9JVI0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 AL035633.1-201ENST00000406139 838 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 SPCS2P4-201ENST00000436160 681 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 CNN2P2-201ENST00000443536 909 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 CNN2P3-201ENST00000450201 906 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 DUX4L27-201ENST00000554796 1261 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 AL136317.3-201ENST00000618497 906 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 AP001059.3-201ENST00000619053 235 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 AL353732.1-201ENST00000569618 1459 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 HCG11-201ENST00000411553 5696 ntBASIC19.64■□□□□ 0.73
USP17L11C9JVI0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP17L11C9JVI0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP17L11C9JVI0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms