Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 KRT19P2-202ENST00000557173 1012 ntBASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
YJEFN3A6XGL0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
YJEFN3A6XGL0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
YJEFN3A6XGL0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 AC005412.3-201ENST00000580309 715 ntBASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 AC023141.13-201ENST00000604991 943 ntBASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YJEFN3A6XGL0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AL353732.1-201ENST00000569618 1459 ntBASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AC005915.1-201ENST00000624912 2018 ntBASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 MPDU1-223ENST00000582151 728 ntBASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AC007064.4-201ENST00000637740 555 ntBASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.69■□□□□ 0.42
YJEFN3A6XGL0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
YJEFN3A6XGL0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms