Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 AC092597.1-201ENST00000487352 616 ntBASIC14.6□□□□□ -0.07
TMEM235A6NFC5 AL441883.1-201ENST00000566170 1045 ntBASIC14.6□□□□□ -0.07
TMEM235A6NFC5 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 ALOX12P2-203ENST00000570921 1945 ntBASIC14.6□□□□□ -0.07
TMEM235A6NFC5 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TMEM235A6NFC5 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 AL391256.1-201ENST00000443260 1855 ntBASIC14.59□□□□□ -0.07
TMEM235A6NFC5 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.59□□□□□ -0.07
TMEM235A6NFC5 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 AL645728.1-201ENST00000366221 2101 ntBASIC14.59□□□□□ -0.07
TMEM235A6NFC5 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TMEM235A6NFC5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TMEM235A6NFC5 AC105917.1-201ENST00000506637 2539 ntBASIC14.58□□□□□ -0.07
TMEM235A6NFC5 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM235A6NFC5 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms