Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 AP001059.3-201ENST00000619053 235 ntBASIC14.87□□□□□ -0.03
MBD3L3A6NE82 AC008267.7-201ENST00000624570 1194 ntBASIC14.87□□□□□ -0.03
MBD3L3A6NE82 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
MBD3L3A6NE82 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 AC007613.1-201ENST00000572811 2597 ntBASIC14.86□□□□□ -0.03
MBD3L3A6NE82 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.86□□□□□ -0.03
MBD3L3A6NE82 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 GPS2P2-201ENST00000430745 888 ntBASIC14.86□□□□□ -0.03
MBD3L3A6NE82 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 LINC00896-202ENST00000609602 2128 ntBASIC14.86□□□□□ -0.03
MBD3L3A6NE82 AC067852.2-201ENST00000590513 2313 ntBASIC14.86□□□□□ -0.03
MBD3L3A6NE82 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MBD3L3A6NE82 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 AC016027.1-202ENST00000607927 1699 ntBASIC14.85□□□□□ -0.03
MBD3L3A6NE82 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 CNN2P2-201ENST00000443536 909 ntBASIC14.85□□□□□ -0.03
MBD3L3A6NE82 CNN2P3-201ENST00000450201 906 ntBASIC14.85□□□□□ -0.03
MBD3L3A6NE82 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 AC093512.1-201ENST00000617969 520 ntBASIC14.85□□□□□ -0.03
MBD3L3A6NE82 AL136317.3-201ENST00000618497 906 ntBASIC14.85□□□□□ -0.03
MBD3L3A6NE82 Z92544.3-201ENST00000624747 417 ntBASIC14.85□□□□□ -0.03
MBD3L3A6NE82 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.85□□□□□ -0.03
MBD3L3A6NE82 LINC00895-201ENST00000629028 1637 ntBASIC14.84□□□□□ -0.03
MBD3L3A6NE82 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MBD3L3A6NE82 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms