Protein–RNA interactions for Protein: A4D0S4

LAMB4, Laminin subunit beta-4, humanhuman

Predictions only

Length 1,761 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB4A4D0S4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 DPM2-202ENST00000373110 738 ntTSL 2 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 DUT-210ENST00000559935 569 ntTSL 3 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC21.2■□□□□ 0.98
LAMB4A4D0S4 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 AC141586.5-201ENST00000624546 2050 ntBASIC21.19■□□□□ 0.98
LAMB4A4D0S4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 RNA5SP410-201ENST00000516285 106 ntBASIC21.19■□□□□ 0.98
LAMB4A4D0S4 AP002490.2-201ENST00000524791 560 ntBASIC21.19■□□□□ 0.98
LAMB4A4D0S4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LAMB4A4D0S4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 KRT8P39-201ENST00000396270 1433 ntBASIC21.18■□□□□ 0.98
LAMB4A4D0S4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 AC008761.3-201ENST00000624803 892 ntBASIC21.18■□□□□ 0.98
LAMB4A4D0S4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 AC093724.1-201ENST00000448659 1027 ntBASIC21.18■□□□□ 0.98
LAMB4A4D0S4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.18■□□□□ 0.98
LAMB4A4D0S4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LAMB4A4D0S4 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms