Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TRBV5-4A0A0C4DH59 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-4A0A0C4DH59 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-4A0A0C4DH59 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-4A0A0C4DH59 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-4A0A0C4DH59 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRBV5-4A0A0C4DH59 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 SLC25A1P1-201ENST00000528351 927 ntBASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRBV5-4A0A0C4DH59 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.71■□□□□ 0.26
TRBV5-4A0A0C4DH59 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRBV5-4A0A0C4DH59 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 HCG4-201ENST00000418983 998 ntBASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 RHOQP3-201ENST00000437982 621 ntBASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC106730.1-201ENST00000566722 1090 ntBASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC120114.3-201ENST00000611923 658 ntBASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.7■□□□□ 0.26
TRBV5-4A0A0C4DH59 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 HLA-J-202ENST00000469281 1241 ntBASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC096734.2-201ENST00000562054 433 ntBASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 CYP2A7P1-201ENST00000595391 815 ntBASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.69■□□□□ 0.26
TRBV5-4A0A0C4DH59 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV5-4A0A0C4DH59 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms