Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 MED15P5-201ENST00000423150 992 ntBASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 AC145285.3-201ENST00000564603 959 ntBASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.24■□□□□ 0.35
RAI2Q9Y5P3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 AC108073.2-201ENST00000464002 357 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 AC108751.1-201ENST00000490852 363 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 MIR3687-2-201ENST00000577708 61 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 AC239800.4-201ENST00000603712 296 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 MIR3687-1-201ENST00000614492 61 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 AC079781.4-201ENST00000641908 219 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 AC092068.3-201ENST00000587894 2016 ntBASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RAI2Q9Y5P3 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 YBX2P1-201ENST00000394192 760 ntBASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 AC009947.1-201ENST00000444350 727 ntBASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 AC004967.1-201ENST00000453589 447 ntBASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 AC087163.2-201ENST00000457299 853 ntBASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 FAM197Y3-203ENST00000618346 717 ntBASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 AC004790.2-201ENST00000623588 572 ntBASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 AC134684.3-201ENST00000641758 218 ntBASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAI2Q9Y5P3 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms