Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 RNU1-129P-201ENST00000384064 167 ntBASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 U1.21-201ENST00000580816 167 ntBASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 AC084121.4-201ENST00000641598 221 ntBASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 AF228730.8-201ENST00000642140 221 ntBASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 SLC22A20-204ENST00000530038 1673 ntBASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB7Q9Y5E2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 SLC25A39P2-201ENST00000537614 270 ntBASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 AC008267.7-201ENST00000624570 1194 ntBASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB7Q9Y5E2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 AC093525.9-201ENST00000624961 1746 ntBASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 SPDYE14P-201ENST00000442619 822 ntBASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 AC140878.1-201ENST00000565277 250 ntBASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 AC027307.2-201ENST00000591252 911 ntBASIC18.23■□□□□ 0.51
PCDHB7Q9Y5E2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms