Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 KRT18P5-201ENST00000436075 1291 ntBASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 AC097658.1-201ENST00000475555 843 ntBASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 AC092384.3-202ENST00000564646 2873 ntBASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 AC107918.4-201ENST00000641966 3141 ntBASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 AL359258.3-201ENST00000622910 2331 ntBASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CHTOPQ9Y3Y2 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 LINC02012-201ENST00000608206 1725 ntBASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 MIR3180-5-201ENST00000583743 153 ntBASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AC046185.3-201ENST00000623228 1824 ntBASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AOC4P-203ENST00000566825 2289 ntBASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 AC139749.1-202ENST00000617529 3139 ntBASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
CHTOPQ9Y3Y2 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.3□□□□□ -0.44
CHTOPQ9Y3Y2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms