Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 KRT8P10-201ENST00000450021 1447 ntBASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC11.91□□□□□ -0.5
UBE2D4Q9Y2X8 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 AL645728.1-201ENST00000366221 2101 ntBASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 Z83836.1-201ENST00000624605 1642 ntBASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 HBZP1-201ENST00000354915 429 ntBASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 AC125634.1-201ENST00000438758 1403 ntBASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 AC009336.1-201ENST00000608941 1553 ntBASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 AC011558.1-201ENST00000623459 338 ntBASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
UBE2D4Q9Y2X8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
UBE2D4Q9Y2X8 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 AL353593.2-201ENST00000602529 1483 ntBASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 FAM220CP-201ENST00000395253 831 ntBASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 STK19B-204ENST00000512515 211 ntBASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 AC010203.1-204ENST00000548782 407 ntBASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC11.89□□□□□ -0.51
UBE2D4Q9Y2X8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms