Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 AC138761.1-201ENST00000584393 385 ntBASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 NEFHP1-201ENST00000412845 2629 ntBASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LEMD3Q9Y2U8 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.53■□□□□ 0.88
LEMD3Q9Y2U8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 GNAS-203ENST00000306120 1878 ntBASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 FO538757.1-201ENST00000623083 1397 ntBASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 AL138918.1-201ENST00000568306 659 ntBASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 LINC00896-202ENST00000609602 2128 ntBASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LEMD3Q9Y2U8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.87
LEMD3Q9Y2U8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
LEMD3Q9Y2U8 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
LEMD3Q9Y2U8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.52■□□□□ 0.87
LEMD3Q9Y2U8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 TREML5P-201ENST00000421694 576 ntBASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 AL158211.3-201ENST00000607385 239 ntBASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 MIR6080-201ENST00000617359 66 ntBASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 LINC00895-201ENST00000629028 1637 ntBASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC20.51■□□□□ 0.87
LEMD3Q9Y2U8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms