Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
NINLQ9Y2I6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
NINLQ9Y2I6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 AC069335.1-201ENST00000489972 472 ntBASIC23.14■■□□□ 1.29
NINLQ9Y2I6 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC23.14■■□□□ 1.29
NINLQ9Y2I6 AC012645.4-201ENST00000610691 1061 ntBASIC23.14■■□□□ 1.29
NINLQ9Y2I6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 CDK2AP2P3-201ENST00000422476 372 ntBASIC23.13■■□□□ 1.29
NINLQ9Y2I6 SPCS2P4-201ENST00000436160 681 ntBASIC23.13■■□□□ 1.29
NINLQ9Y2I6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 KRT8P23-201ENST00000560090 1207 ntBASIC23.13■■□□□ 1.29
NINLQ9Y2I6 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 AC021097.1-201ENST00000607902 574 ntBASIC23.13■■□□□ 1.29
NINLQ9Y2I6 AC093028.1-201ENST00000622998 982 ntBASIC23.13■■□□□ 1.29
NINLQ9Y2I6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC23.13■■□□□ 1.29
NINLQ9Y2I6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 BSG-215ENST00000618006 1329 ntTSL 2 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC23.12■■□□□ 1.29
NINLQ9Y2I6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
NINLQ9Y2I6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms