Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AC073621.1-201ENST00000392730 636 ntBASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 PAWRP1-201ENST00000451083 565 ntBASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 PCDHB17P-201ENST00000539533 2393 ntBASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
AP4E1Q9UPM8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 AC136632.2-201ENST00000512891 861 ntBASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 AL160237.2-201ENST00000556165 472 ntBASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 AC012640.2-201ENST00000561606 901 ntBASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 PI4KAP1-204ENST00000612579 1703 ntBASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 AC099398.1-201ENST00000567919 2776 ntBASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
AP4E1Q9UPM8 AL021920.2-201ENST00000624828 1351 ntBASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 RNF216P1-203ENST00000404404 2427 ntBASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 RPS15P9-201ENST00000494093 319 ntBASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 AC105339.3-201ENST00000560043 636 ntBASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 AL773604.1-201ENST00000617417 272 ntBASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 FAM215A-202ENST00000632077 792 ntBASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
AP4E1Q9UPM8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms