Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 AC129492.6-201ENST00000611383 1305 ntBASIC17.95■□□□□ 0.46
PCDHGC3Q9UN70 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 AC098831.1-202ENST00000438821 336 ntBASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 IGHV3-22-201ENST00000520721 359 ntBASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 OR7E47P-204ENST00000575924 449 ntBASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGC3Q9UN70 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 MRPL20P1-201ENST00000400819 433 ntBASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 STK33P1-201ENST00000423835 1218 ntBASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 AC091167.2-201ENST00000579581 588 ntBASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 MIR4492-201ENST00000581627 80 ntBASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 MPDU1-223ENST00000582151 728 ntBASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 AL139011.1-202ENST00000642063 584 ntBASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGC3Q9UN70 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGC3Q9UN70 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHGC3Q9UN70 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms