Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
SYNPO2Q9UMS6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 FAM58DP-201ENST00000428076 619 ntBASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SYNPO2Q9UMS6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 CNN2P2-201ENST00000443536 909 ntBASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 CNN2P3-201ENST00000450201 906 ntBASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 KRT18P34-201ENST00000488218 1270 ntBASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 AP000842.3-202ENST00000569238 1080 ntBASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 AL136317.3-201ENST00000618497 906 ntBASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SYNPO2Q9UMS6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 KRT8P39-201ENST00000396270 1433 ntBASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 AC027307.2-201ENST00000591252 911 ntBASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SYNPO2Q9UMS6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms