Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AC091812.2-201ENST00000619081 385 ntBASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AL645728.2-201ENST00000641974 660 ntBASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.5■□□□□ 0.23
CPNE7Q9UBL6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AP006288.1-201ENST00000446065 395 ntBASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 DNAJB3-202ENST00000449667 1266 ntBASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 CEND1P1-201ENST00000451006 455 ntBASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AC092183.1-201ENST00000469884 875 ntBASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AC005412.3-201ENST00000580309 715 ntBASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE7Q9UBL6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 AC008894.3-201ENST00000624324 3103 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 ACTG1P14-201ENST00000446382 1122 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 AL031432.2-201ENST00000566714 459 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 AL928711.1-201ENST00000570165 459 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 AP002472.1-201ENST00000577490 586 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 MIR4515-201ENST00000584082 81 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 FRMD8P1-201ENST00000440433 1524 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 AC092919.2-201ENST00000623631 1645 ntBASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE7Q9UBL6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE7Q9UBL6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE7Q9UBL6 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CPNE7Q9UBL6 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE7Q9UBL6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CPNE7Q9UBL6 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms