Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 AL591684.3-201ENST00000605187 298 ntBASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 AC097637.2-201ENST00000624096 1997 ntBASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NEUROD4Q9HD90 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 AL118508.1-201ENST00000613502 2345 ntBASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NEUROD4Q9HD90 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 AC078925.2-201ENST00000624013 1973 ntBASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 AC124067.4-201ENST00000519691 2379 ntBASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 LINC01711-201ENST00000598340 967 ntBASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 AC138894.3-201ENST00000603787 634 ntBASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 GPALPP1-207ENST00000611650 899 ntBASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NEUROD4Q9HD90 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms