Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 AC091167.2-201ENST00000579581 588 ntBASIC20.06■□□□□ 0.8
RNF41Q9H4P4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 ACTL9-202ENST00000612068 1252 ntBASIC20.06■□□□□ 0.8
RNF41Q9H4P4 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 AC010507.1-201ENST00000633895 436 ntBASIC20.06■□□□□ 0.8
RNF41Q9H4P4 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF41Q9H4P4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 MIR940-201ENST00000401276 94 ntBASIC20.05■□□□□ 0.8
RNF41Q9H4P4 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.05■□□□□ 0.8
RNF41Q9H4P4 RHOQP3-201ENST00000437982 621 ntBASIC20.05■□□□□ 0.8
RNF41Q9H4P4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 AL353732.1-201ENST00000569618 1459 ntBASIC20.05■□□□□ 0.8
RNF41Q9H4P4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF41Q9H4P4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 KRT18P2-201ENST00000447938 1258 ntBASIC20.04■□□□□ 0.8
RNF41Q9H4P4 POLD2P1-201ENST00000511220 997 ntBASIC20.04■□□□□ 0.8
RNF41Q9H4P4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 AL121761.2-201ENST00000598007 1648 ntBASIC20.04■□□□□ 0.8
RNF41Q9H4P4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF41Q9H4P4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.03■□□□□ 0.8
RNF41Q9H4P4 AC007064.4-201ENST00000637740 555 ntBASIC20.03■□□□□ 0.8
RNF41Q9H4P4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms