Protein–RNA interactions for Protein: Q9H0K1

SIK2, Serine/threonine-protein kinase SIK2, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIK2Q9H0K1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
SIK2Q9H0K1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIK2Q9H0K1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIK2Q9H0K1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.71■□□□□ 0.43
SIK2Q9H0K1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.71■□□□□ 0.42
SIK2Q9H0K1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SIK2Q9H0K1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.71■□□□□ 0.42
SIK2Q9H0K1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
SIK2Q9H0K1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
SIK2Q9H0K1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 AC009947.1-201ENST00000444350 727 ntBASIC17.7■□□□□ 0.42
SIK2Q9H0K1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 TERC-201ENST00000602385 541 ntBASIC17.7■□□□□ 0.42
SIK2Q9H0K1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 Z83851.2-201ENST00000609564 659 ntBASIC17.7■□□□□ 0.42
SIK2Q9H0K1 GGTLC5P-201ENST00000617623 998 ntBASIC17.7■□□□□ 0.42
SIK2Q9H0K1 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIK2Q9H0K1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 AC092068.3-201ENST00000587894 2016 ntBASIC17.69■□□□□ 0.42
SIK2Q9H0K1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 AL022342.1-201ENST00000400363 863 ntBASIC17.69■□□□□ 0.42
SIK2Q9H0K1 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 MIR4751-201ENST00000578027 74 ntBASIC17.69■□□□□ 0.42
SIK2Q9H0K1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SIK2Q9H0K1 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 FRMD8P1-201ENST00000440433 1524 ntBASIC17.68■□□□□ 0.42
SIK2Q9H0K1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 AC080080.1-201ENST00000625121 2420 ntBASIC17.68■□□□□ 0.42
SIK2Q9H0K1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 AP000347.1-202ENST00000435868 847 ntBASIC17.68■□□□□ 0.42
SIK2Q9H0K1 AC060834.1-201ENST00000443027 2032 ntBASIC17.68■□□□□ 0.42
SIK2Q9H0K1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 PAWRP1-201ENST00000451083 565 ntBASIC17.68■□□□□ 0.42
SIK2Q9H0K1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.68■□□□□ 0.42
SIK2Q9H0K1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms