Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC138969.3-201ENST00000546612 1459 ntBASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 AC138932.2-201ENST00000548268 1459 ntBASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 AC126755.4-201ENST00000549796 1459 ntBASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 GPR53P-205ENST00000457298 1084 ntBASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 AL133215.2-201ENST00000609242 977 ntBASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 AC116353.5-201ENST00000638148 1699 ntBASIC21.21■□□□□ 0.99
CNTNAP4Q9C0A0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 AC007541.1-201ENST00000570282 1469 ntBASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 AC073439.1-201ENST00000624121 1774 ntBASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 AC098614.1-201ENST00000368528 745 ntBASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 SPTSSB-204ENST00000617024 1292 ntBASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CNTNAP4Q9C0A0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 MTND6P24-201ENST00000440466 518 ntBASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 IGHV3-71-201ENST00000523324 359 ntBASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 AC010336.2-201ENST00000564226 506 ntBASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CNTNAP4Q9C0A0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 AL354751.1-201ENST00000412768 1863 ntBASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 AC105021.1-202ENST00000570572 669 ntBASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 SIGLEC29P-201ENST00000599873 1114 ntBASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 IGHV3-72-202ENST00000621503 303 ntBASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CNTNAP4Q9C0A0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.17■□□□□ 0.98
CNTNAP4Q9C0A0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CNTNAP4Q9C0A0 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms