Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC138894.3-201ENST00000603787 634 ntBASIC16.74■□□□□ 0.27
NPAS2Q99743 AL691432.3-201ENST00000621860 400 ntBASIC16.74■□□□□ 0.27
NPAS2Q99743 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.74■□□□□ 0.27
NPAS2Q99743 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NPAS2Q99743 NSUN5P1-202ENST00000421140 1535 ntBASIC16.74■□□□□ 0.27
NPAS2Q99743 NSUN5P2-203ENST00000457352 1529 ntBASIC16.74■□□□□ 0.27
NPAS2Q99743 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
NPAS2Q99743 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS2Q99743 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.74■□□□□ 0.27
NPAS2Q99743 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPAS2Q99743 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS2Q99743 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 AC011270.2-201ENST00000624293 2550 ntBASIC16.73■□□□□ 0.27
NPAS2Q99743 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 AC026396.1-201ENST00000419388 421 ntBASIC16.73■□□□□ 0.27
NPAS2Q99743 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS2Q99743 KRT18P31-201ENST00000506277 1292 ntBASIC16.73■□□□□ 0.27
NPAS2Q99743 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.73■□□□□ 0.27
NPAS2Q99743 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 AC099336.1-202ENST00000602961 463 ntBASIC16.73■□□□□ 0.27
NPAS2Q99743 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NPAS2Q99743 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.73■□□□□ 0.27
NPAS2Q99743 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.73■□□□□ 0.27
NPAS2Q99743 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPAS2Q99743 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPAS2Q99743 AL391005.1-201ENST00000623953 2435 ntBASIC16.72■□□□□ 0.27
NPAS2Q99743 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NPAS2Q99743 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NPAS2Q99743 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NPAS2Q99743 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NPAS2Q99743 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NPAS2Q99743 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.72■□□□□ 0.27
NPAS2Q99743 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 AC246785.2-201ENST00000432512 513 ntBASIC16.72■□□□□ 0.27
NPAS2Q99743 EMBP1-201ENST00000458200 901 ntBASIC16.72■□□□□ 0.27
NPAS2Q99743 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 AC068472.1-201ENST00000474589 881 ntBASIC16.72■□□□□ 0.27
NPAS2Q99743 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.72■□□□□ 0.27
NPAS2Q99743 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.72■□□□□ 0.27
NPAS2Q99743 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.72■□□□□ 0.27
NPAS2Q99743 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.72■□□□□ 0.27
NPAS2Q99743 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NPAS2Q99743 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms