Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 LINC00982-205ENST00000420957 435 ntBASIC16.2■□□□□ 0.18
BBS4Q96RK4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BBS4Q96RK4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BBS4Q96RK4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BBS4Q96RK4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
BBS4Q96RK4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
BBS4Q96RK4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
BBS4Q96RK4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
BBS4Q96RK4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 AC092068.3-201ENST00000587894 2016 ntBASIC16.19■□□□□ 0.18
BBS4Q96RK4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 TSPY19P-201ENST00000418461 509 ntBASIC16.19■□□□□ 0.18
BBS4Q96RK4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 TSPY18P-201ENST00000441642 509 ntBASIC16.19■□□□□ 0.18
BBS4Q96RK4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 AL139288.1-201ENST00000623748 933 ntBASIC16.19■□□□□ 0.18
BBS4Q96RK4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 AC005915.1-201ENST00000624912 2018 ntBASIC16.19■□□□□ 0.18
BBS4Q96RK4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
BBS4Q96RK4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
BBS4Q96RK4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 PRYP5-201ENST00000451909 266 ntBASIC16.18■□□□□ 0.18
BBS4Q96RK4 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 NKAPP1-205ENST00000585790 367 ntBASIC16.18■□□□□ 0.18
BBS4Q96RK4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 AL022326.1-202ENST00000641533 845 ntBASIC16.18■□□□□ 0.18
BBS4Q96RK4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 AC106886.4-201ENST00000623557 2502 ntBASIC16.18■□□□□ 0.18
BBS4Q96RK4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
BBS4Q96RK4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
BBS4Q96RK4 AC011676.5-201ENST00000624864 2660 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms