Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IPQ96QF0 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.69■□□□□ 0.26
RAB3IPQ96QF0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RAB3IPQ96QF0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AP002982.1-201ENST00000492365 877 ntBASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 KRT18P6-201ENST00000555540 1265 ntBASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 ME2P1-201ENST00000426028 1970 ntBASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RAB3IPQ96QF0 AC073347.1-201ENST00000421633 2643 ntBASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 TNRC18P2-201ENST00000417666 2714 ntBASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 RPS2P4-201ENST00000476944 856 ntBASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 RNA5SP413-201ENST00000516373 109 ntBASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 UNC93B5-201ENST00000530315 699 ntBASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 KRT16P1-201ENST00000399124 1418 ntBASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RAB3IPQ96QF0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.66■□□□□ 0.26
RAB3IPQ96QF0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms