Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 SPTLC1P1-201ENST00000447199 261 ntBASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 HLA-V-204ENST00000476601 1289 ntBASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 AC007967.4-201ENST00000614700 386 ntBASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
NECTIN4Q96NY8 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 ATP5G2P4-201ENST00000442175 420 ntBASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 AC105233.2-201ENST00000523697 349 ntBASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 AF228730.5-201ENST00000530288 346 ntBASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 RARRES2P9-201ENST00000565168 469 ntBASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NECTIN4Q96NY8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 AC016027.1-202ENST00000607927 1699 ntBASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 SPDYE12P-201ENST00000618416 771 ntBASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NECTIN4Q96NY8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN4Q96NY8 AC093503.3-201ENST00000624917 2352 ntBASIC17.52■□□□□ 0.39
NECTIN4Q96NY8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN4Q96NY8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN4Q96NY8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NECTIN4Q96NY8 TOP3BP1-201ENST00000420768 1380 ntBASIC17.52■□□□□ 0.39
NECTIN4Q96NY8 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.52■□□□□ 0.39
NECTIN4Q96NY8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NECTIN4Q96NY8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms