Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.29■□□□□ 0.2
ITCHQ96J02 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 AC092171.3-201ENST00000610122 2651 ntBASIC16.29■□□□□ 0.2
ITCHQ96J02 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ITCHQ96J02 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ITCHQ96J02 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ITCHQ96J02 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 TUBB8P12-201ENST00000308911 1335 ntBASIC16.28■□□□□ 0.2
ITCHQ96J02 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 TUBB7P-202ENST00000428444 1305 ntBASIC16.28■□□□□ 0.2
ITCHQ96J02 TUBB8P7-204ENST00000567960 1332 ntBASIC16.28■□□□□ 0.2
ITCHQ96J02 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.28■□□□□ 0.2
ITCHQ96J02 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.28■□□□□ 0.2
ITCHQ96J02 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.28■□□□□ 0.2
ITCHQ96J02 AL136038.3-201ENST00000561909 1096 ntBASIC16.28■□□□□ 0.2
ITCHQ96J02 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 AC011467.2-201ENST00000598425 242 ntBASIC16.28■□□□□ 0.2
ITCHQ96J02 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ITCHQ96J02 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 AD001527.2-201ENST00000622994 785 ntBASIC16.28■□□□□ 0.2
ITCHQ96J02 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
ITCHQ96J02 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.28■□□□□ 0.2
ITCHQ96J02 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ITCHQ96J02 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.28■□□□□ 0.2
ITCHQ96J02 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
ITCHQ96J02 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.27■□□□□ 0.2
ITCHQ96J02 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.27■□□□□ 0.2
ITCHQ96J02 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.27■□□□□ 0.2
ITCHQ96J02 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.27■□□□□ 0.2
ITCHQ96J02 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.27■□□□□ 0.2
ITCHQ96J02 AC073592.5-201ENST00000624854 528 ntBASIC16.27■□□□□ 0.2
ITCHQ96J02 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
ITCHQ96J02 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
ITCHQ96J02 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
ITCHQ96J02 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ITCHQ96J02 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.27■□□□□ 0.19
ITCHQ96J02 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
ITCHQ96J02 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
ITCHQ96J02 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.27■□□□□ 0.19
ITCHQ96J02 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.27■□□□□ 0.19
ITCHQ96J02 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
ITCHQ96J02 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.27■□□□□ 0.19
ITCHQ96J02 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ITCHQ96J02 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITCHQ96J02 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
ITCHQ96J02 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITCHQ96J02 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
ITCHQ96J02 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ITCHQ96J02 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.26■□□□□ 0.19
ITCHQ96J02 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ITCHQ96J02 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
ITCHQ96J02 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms