Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 AP000867.4-201ENST00000641616 219 ntBASIC17.62■□□□□ 0.41
IFT43Q96FT9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
IFT43Q96FT9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IFT43Q96FT9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 AC139887.3-201ENST00000568585 713 ntBASIC17.61■□□□□ 0.41
IFT43Q96FT9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 AC148477.8-201ENST00000624298 468 ntBASIC17.61■□□□□ 0.41
IFT43Q96FT9 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 AF228730.7-201ENST00000641842 219 ntBASIC17.61■□□□□ 0.41
IFT43Q96FT9 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IFT43Q96FT9 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.61■□□□□ 0.41
IFT43Q96FT9 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 UBALD1-205ENST00000590891 2641 ntBASIC17.6■□□□□ 0.41
IFT43Q96FT9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 MIR574-201ENST00000385209 96 ntBASIC17.6■□□□□ 0.41
IFT43Q96FT9 AL020989.1-201ENST00000422979 469 ntBASIC17.6■□□□□ 0.41
IFT43Q96FT9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.6■□□□□ 0.41
IFT43Q96FT9 AL671883.3-201ENST00000603274 991 ntBASIC17.6■□□□□ 0.41
IFT43Q96FT9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IFT43Q96FT9 FAM215A-202ENST00000632077 792 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms