Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CDCA5Q96FF9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 AL391825.1-201ENST00000457671 1364 ntBASIC19.71■□□□□ 0.75
CDCA5Q96FF9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 AP000974.1-201ENST00000623909 2387 ntBASIC19.71■□□□□ 0.75
CDCA5Q96FF9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 EGFEM1P-202ENST00000431685 1563 ntBASIC19.71■□□□□ 0.75
CDCA5Q96FF9 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 RAB43P1-201ENST00000561790 589 ntBASIC19.71■□□□□ 0.75
CDCA5Q96FF9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.71■□□□□ 0.75
CDCA5Q96FF9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 FAM220BP-201ENST00000377689 816 ntBASIC19.7■□□□□ 0.74
CDCA5Q96FF9 AL080243.2-201ENST00000418783 582 ntBASIC19.7■□□□□ 0.74
CDCA5Q96FF9 AC245100.3-201ENST00000441281 285 ntBASIC19.7■□□□□ 0.74
CDCA5Q96FF9 AC011495.1-201ENST00000498085 584 ntBASIC19.7■□□□□ 0.74
CDCA5Q96FF9 AC106886.1-201ENST00000568660 600 ntBASIC19.7■□□□□ 0.74
CDCA5Q96FF9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CDCA5Q96FF9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 SPDYE19P-201ENST00000338590 713 ntBASIC19.69■□□□□ 0.74
CDCA5Q96FF9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 AC105021.1-202ENST00000570572 669 ntBASIC19.69■□□□□ 0.74
CDCA5Q96FF9 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 AL133215.2-201ENST00000609242 977 ntBASIC19.69■□□□□ 0.74
CDCA5Q96FF9 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CDCA5Q96FF9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CDCA5Q96FF9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms