Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 FGFR3P6-201ENST00000457012 610 ntBASIC17.36■□□□□ 0.37
RTP4Q96DX8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RTP4Q96DX8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTP4Q96DX8 AC006277.1-201ENST00000624348 1610 ntBASIC17.36■□□□□ 0.37
RTP4Q96DX8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 AKR1C7P-201ENST00000305623 895 ntBASIC17.35■□□□□ 0.37
RTP4Q96DX8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 MTDHP3-201ENST00000594186 672 ntBASIC17.35■□□□□ 0.37
RTP4Q96DX8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.35■□□□□ 0.37
RTP4Q96DX8 HCG11-201ENST00000411553 5696 ntBASIC17.35■□□□□ 0.37
RTP4Q96DX8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RTP4Q96DX8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTP4Q96DX8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 TOP3BP1-201ENST00000420768 1380 ntBASIC17.34■□□□□ 0.37
RTP4Q96DX8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 AL662844.1-201ENST00000546340 181 ntBASIC17.34■□□□□ 0.37
RTP4Q96DX8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 CYP2T1P-202ENST00000641596 2535 ntBASIC17.34■□□□□ 0.37
RTP4Q96DX8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.34■□□□□ 0.37
RTP4Q96DX8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTP4Q96DX8 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.33■□□□□ 0.37
RTP4Q96DX8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTP4Q96DX8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTP4Q96DX8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms