Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RPGRQ92834 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRQ92834 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RPGRQ92834 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRQ92834 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.85■□□□□ 0.93
RPGRQ92834 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRQ92834 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.85■□□□□ 0.93
RPGRQ92834 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRQ92834 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.85■□□□□ 0.93
RPGRQ92834 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.85■□□□□ 0.93
RPGRQ92834 GAPDHP21-201ENST00000450301 1010 ntBASIC20.85■□□□□ 0.93
RPGRQ92834 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRQ92834 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.85■□□□□ 0.93
RPGRQ92834 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.85■□□□□ 0.93
RPGRQ92834 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.85■□□□□ 0.93
RPGRQ92834 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.85■□□□□ 0.93
RPGRQ92834 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RPGRQ92834 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RPGRQ92834 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPGRQ92834 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RPGRQ92834 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC20.84■□□□□ 0.93
RPGRQ92834 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 GK-202ENST00000378941 458 ntTSL 3 BASIC20.84■□□□□ 0.93
RPGRQ92834 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.84■□□□□ 0.93
RPGRQ92834 AC027369.6-201ENST00000525520 931 ntBASIC20.84■□□□□ 0.93
RPGRQ92834 MPDU1-223ENST00000582151 728 ntBASIC20.84■□□□□ 0.93
RPGRQ92834 COQ4-205ENST00000609948 956 ntTSL 2 BASIC20.84■□□□□ 0.93
RPGRQ92834 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.84■□□□□ 0.93
RPGRQ92834 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.84■□□□□ 0.93
RPGRQ92834 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPGRQ92834 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.84■□□□□ 0.93
RPGRQ92834 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRQ92834 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRQ92834 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRQ92834 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RPGRQ92834 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.83■□□□□ 0.93
RPGRQ92834 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RPGRQ92834 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRQ92834 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.83■□□□□ 0.93
RPGRQ92834 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.83■□□□□ 0.93
RPGRQ92834 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.83■□□□□ 0.93
RPGRQ92834 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC20.83■□□□□ 0.93
RPGRQ92834 CRB3P1-201ENST00000449338 276 ntBASIC20.83■□□□□ 0.93
RPGRQ92834 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.83■□□□□ 0.93
RPGRQ92834 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRQ92834 AC004890.2-204ENST00000481968 304 ntBASIC20.83■□□□□ 0.93
RPGRQ92834 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC20.83■□□□□ 0.93
RPGRQ92834 SERBP1P5-201ENST00000510079 1181 ntBASIC20.83■□□□□ 0.93
RPGRQ92834 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.83■□□□□ 0.93
RPGRQ92834 AP005018.1-201ENST00000525475 301 ntBASIC20.83■□□□□ 0.93
RPGRQ92834 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRQ92834 AC073592.8-201ENST00000624126 511 ntBASIC20.83■□□□□ 0.93
RPGRQ92834 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPGRQ92834 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RPGRQ92834 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.83■□□□□ 0.92
RPGRQ92834 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPGRQ92834 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.82■□□□□ 0.92
RPGRQ92834 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.82■□□□□ 0.92
RPGRQ92834 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.82■□□□□ 0.92
RPGRQ92834 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RPGRQ92834 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 SLC25A6P5-201ENST00000435663 894 ntBASIC20.82■□□□□ 0.92
RPGRQ92834 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPGRQ92834 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPGRQ92834 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.82■□□□□ 0.92
RPGRQ92834 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RPGRQ92834 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPGRQ92834 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms