Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 AC006538.1-201ENST00000567905 1585 ntBASIC15.3■□□□□ 0.04
RNF138Q8WVD3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 AL603756.1-201ENST00000606511 2163 ntBASIC15.3■□□□□ 0.04
RNF138Q8WVD3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 C20orf181-201ENST00000623918 480 ntBASIC15.3■□□□□ 0.04
RNF138Q8WVD3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF138Q8WVD3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 AC092474.2-201ENST00000424288 719 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 MKNK2P1-201ENST00000437526 628 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 YBX1P5-201ENST00000509441 847 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 AC099522.2-201ENST00000607001 744 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 RNF216P1-203ENST00000404404 2427 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 AL671710.1-201ENST00000610245 2349 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF138Q8WVD3 AL512652.2-201ENST00000625156 1716 ntBASIC15.29■□□□□ 0.04
RNF138Q8WVD3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF138Q8WVD3 BX842568.4-201ENST00000421222 227 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms