Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 RASA4DP-201ENST00000460726 1199 ntBASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 KRT18P21-201ENST00000515767 1272 ntBASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 GCSHP2-201ENST00000560971 527 ntBASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 NAPSB-206ENST00000562112 1266 ntBASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 AC010947.1-201ENST00000623454 693 ntBASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 AC079602.3-201ENST00000623931 403 ntBASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 AC010460.3-201ENST00000511359 1579 ntBASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RAB3IL1Q8TBN0 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 AL596257.1-201ENST00000641463 2694 ntBASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 IGHGP-201ENST00000390555 1178 ntBASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 HLA-F-220ENST00000434407 884 ntBASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 FAM210CP-201ENST00000445714 574 ntBASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 ECEL1P2-202ENST00000465689 757 ntBASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 CYP2D8P-201ENST00000433633 1490 ntBASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB3IL1Q8TBN0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB3IL1Q8TBN0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms