Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.63■□□□□ 0.09
CNIH3Q8TBE1 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CNIH3Q8TBE1 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CNIH3Q8TBE1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CNIH3Q8TBE1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 FITM1-202ENST00000559294 800 ntBASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 NEK4P2-201ENST00000580004 1012 ntBASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 AC126177.1-201ENST00000547829 2218 ntBASIC15.62■□□□□ 0.09
CNIH3Q8TBE1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 COX5BP2-201ENST00000392354 334 ntBASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 MTCL1P1-201ENST00000446207 792 ntBASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 C2orf69P3-201ENST00000565542 1120 ntBASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 AC109462.3-201ENST00000573934 613 ntBASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 AC019129.2-201ENST00000609837 1235 ntBASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CNIH3Q8TBE1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 ME2P1-201ENST00000426028 1970 ntBASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CNIH3Q8TBE1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms