Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AL139400.1-201ENST00000366220 510 ntBASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AC004461.1-201ENST00000412461 403 ntBASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 REXO1L3P-201ENST00000622202 1288 ntBASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AC105339.1-204ENST00000636249 355 ntBASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AC129492.6-201ENST00000611383 1305 ntBASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 AC008894.3-201ENST00000624324 3103 ntBASIC17.87■□□□□ 0.45
SHKBP1Q8TBC3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AC141586.5-201ENST00000624546 2050 ntBASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 TSEN15P1-201ENST00000423257 515 ntBASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AC107918.2-201ENST00000530817 355 ntBASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AC093028.1-201ENST00000622998 982 ntBASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SHKBP1Q8TBC3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SHKBP1Q8TBC3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms