Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 AC139713.2-201ENST00000641328 2723 ntBASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TOP3BP1-201ENST00000420768 1380 ntBASIC18.29■□□□□ 0.52
BEST2Q8NFU1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
BEST2Q8NFU1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 AC074386.1-202ENST00000463561 864 ntBASIC18.28■□□□□ 0.52
BEST2Q8NFU1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 DUX4L17-201ENST00000557360 1267 ntBASIC18.28■□□□□ 0.52
BEST2Q8NFU1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 AL691403.2-201ENST00000618460 490 ntBASIC18.28■□□□□ 0.52
BEST2Q8NFU1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
BEST2Q8NFU1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 FZD10-202ENST00000539839 3282 ntBASIC18.27■□□□□ 0.52
BEST2Q8NFU1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 YBX1P5-201ENST00000509441 847 ntBASIC18.27■□□□□ 0.52
BEST2Q8NFU1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 AL645728.2-201ENST00000641974 660 ntBASIC18.27■□□□□ 0.52
BEST2Q8NFU1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST2Q8NFU1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
BEST2Q8NFU1 AL353732.1-201ENST00000569618 1459 ntBASIC18.26■□□□□ 0.51
BEST2Q8NFU1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST2Q8NFU1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms