Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SLC7A5P1-201ENST00000568957 537 ntBASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 MXRA5Y-201ENST00000420610 8000 ntBASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 REV3L-201ENST00000358835 10815 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 Z82170.1-201ENST00000625081 3192 ntBASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 GAS2L1P2-201ENST00000436355 1356 ntBASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
SPTSSBQ8NFR3 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GRK6P1-201ENST00000400595 1711 ntBASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GRAMD4P2-201ENST00000423297 1097 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms