Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 AC051619.7-201ENST00000568314 623 ntBASIC20.85■□□□□ 0.93
RTL9Q8NET4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 AP001350.2-201ENST00000625104 1094 ntBASIC20.85■□□□□ 0.93
RTL9Q8NET4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 AC067863.1-201ENST00000494933 530 ntBASIC20.85■□□□□ 0.93
RTL9Q8NET4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC20.85■□□□□ 0.93
RTL9Q8NET4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RTL9Q8NET4 CYP2A7P1-201ENST00000595391 815 ntBASIC20.85■□□□□ 0.93
RTL9Q8NET4 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RTL9Q8NET4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.84■□□□□ 0.93
RTL9Q8NET4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL9Q8NET4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.83■□□□□ 0.93
RTL9Q8NET4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTL9Q8NET4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.83■□□□□ 0.93
RTL9Q8NET4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL9Q8NET4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL9Q8NET4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL9Q8NET4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL9Q8NET4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL9Q8NET4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RTL9Q8NET4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RTL9Q8NET4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.83■□□□□ 0.93
RTL9Q8NET4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RTL9Q8NET4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL9Q8NET4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL9Q8NET4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL9Q8NET4 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 CNN2P2-201ENST00000443536 909 ntBASIC20.83■□□□□ 0.92
RTL9Q8NET4 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 CNN2P3-201ENST00000450201 906 ntBASIC20.83■□□□□ 0.92
RTL9Q8NET4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
RTL9Q8NET4 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 AL136317.3-201ENST00000618497 906 ntBASIC20.83■□□□□ 0.92
RTL9Q8NET4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.83■□□□□ 0.92
RTL9Q8NET4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms