Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 AC005237.2-201ENST00000434368 219 ntBASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF248Q8NDW4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 AC009336.1-201ENST00000608941 1553 ntBASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 FAM185BP-201ENST00000443595 716 ntBASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 AL513480.1-201ENST00000451731 511 ntBASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 AC116407.2-201ENST00000613639 860 ntBASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF248Q8NDW4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 AC236430.1-201ENST00000402231 743 ntBASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 AC055876.3-201ENST00000431496 288 ntBASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 ADH5P3-201ENST00000433842 1137 ntBASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
ZNF248Q8NDW4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms