Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 AC140113.2-201ENST00000604370 208 ntBASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 AP001094.4-201ENST00000579008 2176 ntBASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 PI4KAP1-204ENST00000612579 1703 ntBASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDH20Q8N6Y1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 NKILA-202ENST00000614771 2598 ntBASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 AC011676.5-201ENST00000624864 2660 ntBASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 MRPL20P1-201ENST00000400819 433 ntBASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 MIR4751-201ENST00000578027 74 ntBASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDH20Q8N6Y1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 CRYGEP-201ENST00000412192 528 ntBASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 POLD2P1-201ENST00000511220 997 ntBASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 AC010654.1-201ENST00000615722 808 ntBASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 AC004790.2-201ENST00000623588 572 ntBASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDH20Q8N6Y1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDH20Q8N6Y1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms