Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AL353732.1-201ENST00000569618 1459 ntBASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 AL121761.2-201ENST00000598007 1648 ntBASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.81■□□□□ 0.28
TRAM1L1Q8N609 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 PMS2P7-201ENST00000506558 1336 ntBASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 AC007064.4-201ENST00000637740 555 ntBASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
TRAM1L1Q8N609 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 PGAM5P1-201ENST00000518923 814 ntBASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.79■□□□□ 0.28
TRAM1L1Q8N609 AC040169.1-201ENST00000565382 521 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms