Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 FGFR3P6-201ENST00000457012 610 ntBASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 CLEC4GP1-201ENST00000596555 870 ntBASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 AL353135.1-201ENST00000606729 504 ntBASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 AL589182.2-201ENST00000619332 1049 ntBASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TTC9CQ8N5M4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 SAPCD2P3-201ENST00000455031 850 ntBASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TTC9CQ8N5M4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 AC064862.7-201ENST00000604520 867 ntBASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TTC9CQ8N5M4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms