Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 FDX1P1-201ENST00000449115 551 ntBASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 AC008667.4-201ENST00000607370 168 ntBASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 AC243591.1-201ENST00000452967 1364 ntBASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 AL021920.2-201ENST00000624828 1351 ntBASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 AP002414.3-201ENST00000589352 1468 ntBASIC16.61■□□□□ 0.25
RAB42Q8N4Z0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 SLC25A1P3-201ENST00000395415 828 ntBASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 AC098831.1-202ENST00000438821 336 ntBASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 AC116407.3-201ENST00000623905 1129 ntBASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB42Q8N4Z0 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 AC012640.2-201ENST00000561606 901 ntBASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 TERC-201ENST00000602385 541 ntBASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RAB42Q8N4Z0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.58■□□□□ 0.25
RAB42Q8N4Z0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB42Q8N4Z0 AL645608.8-201ENST00000606034 2086 ntBASIC16.58■□□□□ 0.25
RAB42Q8N4Z0 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB42Q8N4Z0 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RAB42Q8N4Z0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 MRPL20P1-201ENST00000400819 433 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 IGHV3-65-201ENST00000523210 341 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 AL049840.3-201ENST00000602669 611 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 AC117500.6-201ENST00000624871 588 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 TUBB8P12-201ENST00000308911 1335 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 TUBB7P-202ENST00000428444 1305 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 TUBB8P7-204ENST00000567960 1332 ntBASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RAB42Q8N4Z0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms