Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 PRELID1P1-202ENST00000567272 903 ntBASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 MTDHP4-201ENST00000600287 670 ntBASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHD1LQ86WJ1 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHD1LQ86WJ1 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 AC004706.3-202ENST00000621574 984 ntBASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CHD1LQ86WJ1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHD1LQ86WJ1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.02■□□□□ 0.95
CHD1LQ86WJ1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CHD1LQ86WJ1 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CHD1LQ86WJ1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHD1LQ86WJ1 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms