Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 BX664615.1-201ENST00000443558 458 ntBASIC17.22■□□□□ 0.35
PACS2Q86VP3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 AL137784.3-201ENST00000623858 2288 ntBASIC17.22■□□□□ 0.35
PACS2Q86VP3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PACS2Q86VP3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
PACS2Q86VP3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 KRT8P32-201ENST00000512863 1461 ntBASIC17.21■□□□□ 0.35
PACS2Q86VP3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
PACS2Q86VP3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PACS2Q86VP3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
PACS2Q86VP3 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PACS2Q86VP3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.21■□□□□ 0.34
PACS2Q86VP3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
PACS2Q86VP3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 GPAT2P1-201ENST00000444924 1672 ntBASIC17.2■□□□□ 0.34
PACS2Q86VP3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 AC091489.1-201ENST00000563866 691 ntTSL 3 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 AC008622.2-201ENST00000617006 1229 ntBASIC17.2■□□□□ 0.34
PACS2Q86VP3 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 AC141257.4-201ENST00000634557 245 ntBASIC17.2■□□□□ 0.34
PACS2Q86VP3 AC136944.6-201ENST00000634818 245 ntBASIC17.2■□□□□ 0.34
PACS2Q86VP3 AL031432.5-201ENST00000641059 760 ntBASIC17.2■□□□□ 0.34
PACS2Q86VP3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.2■□□□□ 0.34
PACS2Q86VP3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PACS2Q86VP3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.2■□□□□ 0.34
PACS2Q86VP3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PACS2Q86VP3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PACS2Q86VP3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms