Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AC006058.4-201ENST00000624016 1670 ntBASIC14.23□□□□□ -0.13
ZNF546Q86UE3 LINC00167-201ENST00000530583 1419 ntBASIC14.23□□□□□ -0.13
ZNF546Q86UE3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ZNF546Q86UE3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CA15P1-201ENST00000481698 905 ntBASIC14.22□□□□□ -0.13
ZNF546Q86UE3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 DGCR10-201ENST00000609839 495 ntBASIC14.22□□□□□ -0.13
ZNF546Q86UE3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 AL161772.1-201ENST00000610494 4412 ntBASIC14.22□□□□□ -0.13
ZNF546Q86UE3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.22□□□□□ -0.13
ZNF546Q86UE3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ZNF546Q86UE3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AC022532.1-201ENST00000624563 1728 ntBASIC14.21□□□□□ -0.13
ZNF546Q86UE3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 MIR3180-4-201ENST00000582223 153 ntBASIC14.21□□□□□ -0.13
ZNF546Q86UE3 AC008687.5-201ENST00000593746 558 ntBASIC14.21□□□□□ -0.13
ZNF546Q86UE3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ZNF546Q86UE3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms