Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 CLK3P2-201ENST00000427566 1453 ntBASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RGPD4Q7Z3J3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 AL033527.5-202ENST00000641632 1098 ntBASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 KRT8P49-201ENST00000604166 1432 ntBASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.21■□□□□ 0.99
RGPD4Q7Z3J3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 APRT-204ENST00000563655 709 ntTSL 5 BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 COG4-212ENST00000564653 590 ntTSL 5 BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RGPD4Q7Z3J3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 ELK2AP-201ENST00000392510 1007 ntBASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 AL162726.2-201ENST00000438986 1017 ntBASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 RN7SL190P-201ENST00000582519 257 ntBASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RGPD4Q7Z3J3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 FO681548.1-201ENST00000455617 1132 ntBASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 REXO1L9P-201ENST00000604264 2108 ntBASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RGPD4Q7Z3J3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AC116562.4-201ENST00000641316 2276 ntBASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AC098859.1-201ENST00000502915 1238 ntBASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 MPDU1-223ENST00000582151 728 ntBASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RGPD4Q7Z3J3 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms