Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.8■□□□□ 0.12
TUBA1AQ71U36 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBA1AQ71U36 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 NFIC-211ENST00000641145 8399 ntBASIC15.79■□□□□ 0.12
TUBA1AQ71U36 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 AP002383.4-201ENST00000442518 975 ntBASIC15.79■□□□□ 0.12
TUBA1AQ71U36 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 AC113404.2-201ENST00000507884 177 ntBASIC15.79■□□□□ 0.12
TUBA1AQ71U36 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 AP002414.4-201ENST00000589764 1148 ntBASIC15.79■□□□□ 0.12
TUBA1AQ71U36 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBA1AQ71U36 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 AC022898.2-201ENST00000616822 1312 ntBASIC15.78■□□□□ 0.12
TUBA1AQ71U36 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 AL592071.1-201ENST00000611956 408 ntBASIC15.78■□□□□ 0.12
TUBA1AQ71U36 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TUBA1AQ71U36 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.77■□□□□ 0.12
TUBA1AQ71U36 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TUBA1AQ71U36 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TUBA1AQ71U36 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.77■□□□□ 0.12
TUBA1AQ71U36 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TUBA1AQ71U36 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms