Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 HLA-A-202ENST00000376806 1854 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 KRT8P47-201ENST00000604727 1398 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 BX276092.7-203ENST00000637198 1536 ntBASIC12.93□□□□□ -0.34
MRPL54Q6P161 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
MRPL54Q6P161 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC12.93□□□□□ -0.34
MRPL54Q6P161 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 KRT16P1-201ENST00000399124 1418 ntBASIC12.92□□□□□ -0.34
MRPL54Q6P161 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 AL023875.1-201ENST00000640777 796 ntBASIC12.92□□□□□ -0.34
MRPL54Q6P161 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
MRPL54Q6P161 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
MRPL54Q6P161 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.91□□□□□ -0.34
MRPL54Q6P161 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
MRPL54Q6P161 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms