Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATL3Q6DD88 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ATL3Q6DD88 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATL3Q6DD88 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.46■□□□□ 0.71
ATL3Q6DD88 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ATL3Q6DD88 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.46■□□□□ 0.71
ATL3Q6DD88 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ATL3Q6DD88 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 ME2P1-201ENST00000426028 1970 ntBASIC19.45■□□□□ 0.7
ATL3Q6DD88 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 ATP5G2P1-201ENST00000433580 426 ntBASIC19.45■□□□□ 0.7
ATL3Q6DD88 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 AC087388.1-201ENST00000571370 1112 ntBASIC19.45■□□□□ 0.7
ATL3Q6DD88 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.45■□□□□ 0.7
ATL3Q6DD88 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ATL3Q6DD88 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 AC243591.1-201ENST00000452967 1364 ntBASIC19.44■□□□□ 0.7
ATL3Q6DD88 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 AC099336.1-202ENST00000602961 463 ntBASIC19.44■□□□□ 0.7
ATL3Q6DD88 AL591684.3-201ENST00000605187 298 ntBASIC19.44■□□□□ 0.7
ATL3Q6DD88 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ATL3Q6DD88 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 MTHFR-217ENST00000641820 1569 ntBASIC19.44■□□□□ 0.7
ATL3Q6DD88 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.44■□□□□ 0.7
ATL3Q6DD88 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 OR6D1P-203ENST00000641209 4860 ntBASIC19.43■□□□□ 0.7
ATL3Q6DD88 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 AC069148.1-201ENST00000608741 768 ntBASIC19.43■□□□□ 0.7
ATL3Q6DD88 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ATL3Q6DD88 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ATL3Q6DD88 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms