Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CDCP2Q5VXM1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 PIN1P1-201ENST00000412108 996 ntBASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 AL590560.3-201ENST00000623350 461 ntBASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDCP2Q5VXM1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AL138918.1-201ENST00000568306 659 ntBASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AC009118.2-201ENST00000613275 655 ntBASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AL662799.1-202ENST00000614205 422 ntBASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AC025048.6-201ENST00000634326 1161 ntBASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AC100757.3-201ENST00000622361 1406 ntBASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDCP2Q5VXM1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 AC142381.1-201ENST00000426099 345 ntBASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 AC027369.6-201ENST00000525520 931 ntBASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 AC018529.1-201ENST00000613063 361 ntBASIC16.06■□□□□ 0.16
CDCP2Q5VXM1 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms